Calculator
Formula used
- Worm-like chain (bending stiffness): lp = κ / (kBT)
- Kuhn relation: b = 2lp
- WLC end-to-end mean-square distance:
⟨R²⟩ = 2lpL \left[1 - \frac{lp}{L}\left(1-e^{-L/lp}\right)\right]In “statistics” mode, the calculator numerically inverts this relation using your Rrms and L.
- Optional electrostatics (OSF-style): le = lBλD² / (4A²), so lp = lp,0 + le
How to use this calculator
- Select a calculation mode based on what you measured.
- Enter temperature in Kelvin to define kBT.
- Provide the mode-specific input (κ, b, or Rrms with L).
- Optionally enable electrostatics and enter lB, λD, and A.
- Press Submit to display results above the form.
- Use Download CSV or Download PDF for reporting.
Example data table
| Scenario | Mode | Inputs | Expected lp (nm) |
|---|---|---|---|
| Moderately stiff chain | Bending stiffness | κ = 500 pN·nm², T = 298 K | ≈ 121.4 |
| Equivalent Kuhn representation | Kuhn length | b = 200 nm | 100 |
| Measured end-to-end size | Statistics | L = 1000 nm, Rrms = 600 nm | Estimated by inversion |
Professional article
What persistence length represents
The persistence length lp is the distance over which a polymer’s local tangent direction stays correlated. In the worm-like chain picture, tangent–tangent correlations decay approximately as exp(−s/lp). Larger lp means a stiffer chain and smoother bending over longer segments.
Connecting stiffness to thermal energy
When you know bending stiffness κ, this calculator uses lp = κ/(kBT). The ratio κ/kBT is a competition between elastic resistance to curvature and thermal agitation. At 298 K, kBT ≈ 4.11 pN·nm, so κ in pN·nm² maps directly into nanometer-scale stiffness.
Temperature sensitivity and comparisons
Because lp scales as 1/T for fixed κ, raising temperature reduces the apparent persistence length. For example, if κ is constant, moving from 298 K to 310 K lowers lp by about 3.9%. This matters when comparing experiments taken at different temperatures or when using solvent conditions that shift κ.
Kuhn length as a coarse-grained step
The Kuhn length b is an effective step size for a freely jointed chain that reproduces large-scale statistics. For a worm-like chain, b = 2lp. Reporting b alongside lp helps connect mechanical stiffness to polymer-physics scaling laws, such as estimates of coil size and entropic elasticity.
Using end-to-end statistics to infer lp
If you measured a contour length L and an end-to-end root-mean-square distance Rrms, the calculator inverts the worm-like chain ⟨R²⟩ relation numerically. This approach is useful for microscopy or scattering-derived sizes, and it naturally accounts for intermediate regimes between fully flexible (L/lp ≫ 1) and nearly rigid (L/lp ≪ 1).
Charged polymers and ionic screening
For polyelectrolytes, electrostatic repulsion can stiffen the chain. The optional OSF-style correction uses le = lBλD²/(4A²), so weaker screening (larger λD) increases le quadratically. As a rough guide in water, λD is about 1 nm near 0.1 M salt and about 3 nm near 0.01 M.
Reference values to sanity-check inputs
Typical persistence lengths span many orders of magnitude: flexible synthetic polymers can be below 1 nm, double-stranded DNA is often near 50 nm in moderate salt, actin filaments are on the order of 10 µm, and microtubules can approach millimeter scales. Use these ranges to catch unit mistakes or unrealistic parameters.
Reporting results and uncertainty
When documenting lp, include the method (κ-based, Kuhn-based, or statistical inversion), temperature, and any electrostatic parameters used. If you provide L, the L/lp ratio helps interpret regime and model validity. Exporting CSV/PDF supports traceable reporting and consistent comparison across samples.
FAQs
1) Can lp be larger than the contour length?
Yes. If lp ≫ L, the chain behaves nearly like a rigid rod over its full contour. In that regime, Rrms approaches L and bending fluctuations are small.
2) Why does temperature change the result in κ mode?
In κ mode, lp = κ/(kBT). Higher temperature increases thermal energy, making the same κ appear less stiff, so the computed persistence length decreases.
3) What units should I use for κ?
You can enter κ in pN·nm² or J·m. The calculator converts internally and reports lp in nm and m, so you can keep your lab’s preferred mechanical units.
4) When should I enable the electrostatics correction?
Enable it for charged polymers when ionic strength varies across samples. The correction estimates additional stiffness from screened electrostatic repulsion and is most informative when λD and charge spacing A are known or well-estimated.
5) Why do I need contour length in statistics mode?
The inversion uses both L and Rrms to solve the worm-like chain relation. Without L, the same Rrms could correspond to many different stiffness and length combinations.
6) What does L/lp tell me?
It indicates regime: large values mean flexible, coil-like behavior, while small values mean rod-like behavior. This ratio helps assess whether WLC assumptions and your measurement scale are consistent.
7) How can I validate the output quickly?
Check that Rrms never exceeds L, compare lp to known ranges for similar polymers, and verify that unit conversions (nm, µm, m) match your experimental inputs.